PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028123619.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ARR-B
Protein Properties Length: 673aa    MW: 74035.7 Da    PI: 7.7388
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028123619.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like74.91.1e-23212265155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k++++Wt+ LH +F+ea++++ G e+A+Pk+ilelm+v+g+t+e+v+SHLQkYR+
  XP_028123619.1 212 KAKVVWTNALHGQFLEAIRSI-GLERAVPKKILELMNVPGITRENVASHLQKYRI 265
                     6799*****************.********************************6 PP
2Myb_DNA-binding24.18.2e-08215264248
                      SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                        WT  ++ ++++a++  G +   +k+I + m+  g t++++ s++qky+
   XP_028123619.1 215 VVWTNALHGQFLEAIRSIGLEraVPKKILELMNvPGITRENVASHLQKYR 264
                      68***********************************************7 PP
3Response_reg75.91.5e-25221301109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     +l+vdD+ + +++++ +l++ +y ev +++++ eal +l+ +   +Dl+++D+ mp+m+G+el k+i+ee  klp+++++  +++  +l+ l+ G
  XP_028123619.1  22 ILVVDDDTTCLSIVAAILKSWNY-EVVTVKHPIEALCTLRIRGgsFDLVITDVHMPDMNGFELQKKIHEEF-KLPVVFMSVDDKDGIILKGLQSG 114
                     89*********************.9999*******9999555555************************99.*********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     +  f++Kp++p+el +
  XP_028123619.1 115 GAFFIVKPIAPDELKN 130
                     *************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 673 aa     Download sequence    
MADEMVTSKQ SSQASTFRSI NILVVDDDTT CLSIVAAILK SWNYEVVTVK HPIEALCTLR  60
IRGGSFDLVI TDVHMPDMNG FELQKKIHEE FKLPVVFMSV DDKDGIILKG LQSGGAFFIV  120
KPIAPDELKN LWQYTVAKKK GKTIIEEIGS NEEMSVQETS QTDKGSNEDV ESTSSANKYR  180
KSTKESKRKA LPKDTNNFDK GENKDDCTTP KKAKVVWTNA LHGQFLEAIR SIGLERAVPK  240
KILELMNVPG ITRENVASHL QKYRIFLKRV SQASYKIQSA TERNMVERTF RSTFASGRPS  300
SSMFNRSQLR CGGYIPVPNL GNNISCCSTQ ETSSTNFSMP RFGCTQSLLL CNQGNLKKPT  360
IGNGSAKRPY NHQTSLLLHG NTSGGTGLMT GPNLFEMYQQ KNQLAPQTQS FNNGMLNYNS  420
TTCGVHGYND VGITGYGKMG AFNNSNNLNL KPKPNGNSYK NNDAGYRMAG DGRFAGLGFK  480
GGEASTNYNS NNFLMNGKQN NESMITMPLL SGNFGDHLAQ EVITSNGFQS QGQVSPTTFN  540
RAIQQENNSV TPMPSTPLVQ QNSFGNGQGE SDRFFGLLDN VSDFDSNSFL QPFGEDDLSF  600
NFLNQINIQS PTQQDGSFSQ YHVEANLLVN QQSLGQKPGG GEMVSNFDSA KSQSDEYVPS  660
FEQNPSQASF VSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.15e-61ARR-B family protein