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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028123293.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 506aa MW: 55867.5 Da PI: 6.0593 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.6 | 4.3e-15 | 222 | 281 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_028123293.1 222 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDKEEKAARAYDLAALKYWG 281 57*******************666664478446*************************98 PP | |||||||
2 | AP2 | 49 | 1.5e-15 | 324 | 375 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_028123293.1 324 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATQEEAAEAYDIAAIKFRG 375 57****************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 506 aa Download sequence |
MAPENSNWLS FSLSSVEMLN SSSSRSQMLQ STMNLLPFHG ASPSTSTDDS HNYYFLDNLY 60 ANGWENTKPE GLAMAQSIGD SSIFTSFVDS QINQQPSPKL EDFLGGDSTL VRYSDSQTET 120 QDSSLTHIYD QSGSALFADH PDFRTIDGGF QAFSTNSSSE IDDSASVPMT QLTSGDFSGQ 180 CPNSGLSLGG VVNTQRSEKA LISVDSEETC KKMSDTFGQR TSIYRGVTRH RWTGRYEAHL 240 WDNSCRREGQ ARKGRQVYLG GYDKEEKAAR AYDLAALKYW GPTATTNFPV SNYTKELEEM 300 KHVTKQEFIA SLRRKSSGFS RGASIYRGVT RHHQQGRWQA RIGRVAGNKD LYLGTFATQE 360 EAAEAYDIAA IKFRGVNAVT NFEMNRYDVD TILKSALPIG GAAKRLKLSL EADQKPSLNN 420 LDQQPQCSSN SSSSSIINFT NSSQPLEAIP CGVPFDSTAR YHHDLFHLNS NSAVASDNPG 480 SSSTMVTPMT FLPSAPEFFI WPHQSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10510.1 | 1e-170 | AP2 family protein |