PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028122586.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Dof | ||||||||
Protein Properties | Length: 161aa MW: 18141.5 Da PI: 8.7577 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 121.8 | 2.4e-38 | 43 | 101 | 2 | 60 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++k+++cprC+s++tkfCy+nny+++qPryfCk+C+ryWt+GGalrnvPvG+grrk k XP_028122586.1 43 PDKIIPCPRCKSMETKFCYFNNYNVNQPRYFCKGCQRYWTAGGALRNVPVGAGRRKTKP 101 68999***************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MADVHDGHEG IKLFGATIAV QVRESKDDEP NKAHDDQTLE KRPDKIIPCP RCKSMETKFC 60 YFNNYNVNQP RYFCKGCQRY WTAGGALRNV PVGAGRRKTK PPCRGISGFS ESCFFDSSEM 120 KQFDFDGVVV EWQLAAAASH GGFHRIFPAK RRRSTVDGQS C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34140.1 | 1e-63 | Dof family protein |