PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028122230.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 252aa MW: 28800.2 Da PI: 7.3706 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 50.1 | 4.6e-16 | 30 | 83 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqN Ra++k XP_028122230.1 30 KKRRLNLEQVKTLEKNFELGNKLESERKMQLARALGLQRRQIAIWFQNMRARWK 83 4557899**********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 116.6 | 1.4e-37 | 29 | 120 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+ eqvk+LE++Fe +kLe+erK++lar+Lglq rq+a+WFqn RAR+ktkqlEkdy++ kr++da+k++n++L++++++L++e+ XP_028122230.1 29 EKKRRLNLEQVKTLEKNFELGNKLESERKMQLARALGLQRRQIAIWFQNMRARWKTKQLEKDYDVHKRQFDAIKANNDALQSQNQKLQAEII 120 69**************************************************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MSFSAIEVCD HETNGVEDDL LDDGSQAGEK KRRLNLEQVK TLEKNFELGN KLESERKMQL 60 ARALGLQRRQ IAIWFQNMRA RWKTKQLEKD YDVHKRQFDA IKANNDALQS QNQKLQAEII 120 ALKNREPTKS INLNKEIEGS RSNRSENSSE IKLDISTRTP PAMDSPSSNH HHGHPIIPTS 180 SSTPLFPPSI ITRPTSAAMA HLFLNSSSSS RQPDHKIIDH QNAIKEESFS NMFCAIDDQS 240 GFWPWLEQQH FN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 1e-86 | HD-ZIP family protein |