PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028122156.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Trihelix

Protein Properties

Length: 360aa MW: 41690.2 Da PI: 4.2798

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028122156.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	43.3	9.3e-14	125	211	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrer.gferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 Wt++ + +L+ea ++ +l+r++l+ +W+ev++k++e+ ++ + +qC+++++ l+k+ykk+ke ek + s++ +f++++ XP_028122156.1 125 WTEHATFVLLEAWGDRFLKLGRNSLRSEDWQEVAEKVSEGlKMDWTDTQCRSRLDTLKKKYKKEKEKEKMDgMGGYASKWDFFRKMD 211 ***********************************66527789*******************9875789999*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MDDIEDDARY PPKHYSVNHR LTYDSSTRLK HSNRNPSYPI ESNYGDDNGE DDEYENDELG 60 EEDEALNNEF DDRNDADEGD EEDVENGYDG SERCQKKRRV ESLVSNYEFA PRKSSQGVRN 120 SPVDWTEHAT FVLLEAWGDR FLKLGRNSLR SEDWQEVAEK VSEGLKMDWT DTQCRSRLDT 180 LKKKYKKEKE KEKMDGMGGY ASKWDFFRKM DMLLNSSRQQ FGLPCGVDSG EFVFMNPRVY 240 LNRSNGLDEM RDSPDESESS DDDEDSDGLP SKRKGFGGED HDGSSFRLLA DSVQKFGEIY 300 EKIETSKREQ MMELEKMRMD FQRELEVQKK QILERAQAAI AKIQEGDDDE TDGSAENLSE

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MDDIEDDARY PPKHYSVNHR LTYDSSTRLK HSNRNPSYPI ESNYGDDNGE DDEYENDELG  60
EEDEALNNEF DDRNDADEGD EEDVENGYDG SERCQKKRRV ESLVSNYEFA PRKSSQGVRN  120
SPVDWTEHAT FVLLEAWGDR FLKLGRNSLR SEDWQEVAEK VSEGLKMDWT DTQCRSRLDT  180
LKKKYKKEKE KEKMDGMGGY ASKWDFFRKM DMLLNSSRQQ FGLPCGVDSG EFVFMNPRVY  240
LNRSNGLDEM RDSPDESESS DDDEDSDGLP SKRKGFGGED HDGSSFRLLA DSVQKFGEIY  300
EKIETSKREQ MMELEKMRMD FQRELEVQKK QILERAQAAI AKIQEGDDDE TDGSAENLSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	9e-75	Trihelix family protein