PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028122147.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Nin-like
Protein Properties Length: 281aa    MW: 31723.4 Da    PI: 8.5862
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028122147.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK82.34.9e-26198247352
          RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     +++ l dl+kyF+lpi +A+k+L+v+lTvLK++CR++GI+RWPhRkiksl
  XP_028122147.1 198 SRLALADLAKYFDLPIVEASKNLKVGLTVLKKKCREFGIPRWPHRKIKSL 247
                     57899*******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MASLQGHSLK ALVIFRNYMY PELIRTVHVY QLENGVEKEA EREYVFHSDS PYEEIGSYKV  60
LTLEKFRPSA QFEGRVNGVW LCIYVFDADR HCPPILDGIP TILSISRNPK LASIPTLAND  120
LQIIFQFNHR MKDGEQLQIP PKETSIGNRG GAFQLKSQRI FALDLNSVPN PELDNEESDE  180
ATGIVEKKKK RAATKDISRL ALADLAKYFD LPIVEASKNL KVGLTVLKKK CREFGIPRWP  240
HRKIKSLDSL IHDLQVCIPR DVSFDFLAGE TGRGRTATTG G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.15e-62Nin-like family protein