PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028122146.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Nin-like | ||||||||
Protein Properties | Length: 325aa MW: 37529.3 Da PI: 9.3977 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 82 | 6.1e-26 | 198 | 247 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++ l dl+kyF+lpi +A+k+L+v+lTvLK++CR++GI+RWPhRkiksl XP_028122146.1 198 SRLALADLAKYFDLPIVEASKNLKVGLTVLKKKCREFGIPRWPHRKIKSL 247 57899*******************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence |
MASLQGHSLK ALVIFRNYMY PELIRTVHVY QLENGVEKEA EREYVFHSDS PYEEIGSYKV 60 LTLEKFRPSA QFEGRVNGVW LCIYVFDADR HCPPILDGIP TILSISRNPK LASIPTLAND 120 LQIIFQFNHR MKDGEQLQIP PKETSIGNRG GAFQLKSQRI FALDLNSVPN PELDNEESDE 180 ATGIVEKKKK RAATKDISRL ALADLAKYFD LPIVEASKNL KVGLTVLKKK CREFGIPRWP 240 HRKIKSLDSL IHDLQAEVEQ QQQEDEAAAM VVAKRQKMLE NEKESIEKKP FMEIQRETKK 300 FRQDIFKKRH RARALENQIR TMPLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35590.1 | 7e-79 | Nin-like family protein |