PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028122025.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GATA | ||||||||
Protein Properties | Length: 232aa MW: 25569.9 Da PI: 10.0592 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 61.5 | 1e-19 | 102 | 135 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk + XP_028122025.1 102 CSDCNTTKTPLWRSGPQGPKSLCNACGIRQRKAR 135 *******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MSTPAHLNLS PSPFPLIELK EDHQQLQYLS TPPHQASSSS ISSPIFINIT DQDHPREPQK 60 NQREADKYIL YGGSSDHQAI PSSSSAQPTI VNNSNNNVIR TCSDCNTTKT PLWRSGPQGP 120 KSLCNACGIR QRKARRAMLA AANGMALARA TADSTRIKVQ NKEKKSRCTS YTGQYKKKAF 180 KHHGSPQGKE KISFEDFAMS LSKNSAFRRA FPKDEEEAAI LLMALSCGLL HS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56860.1 | 4e-18 | GATA family protein |