PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028121734.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | CO-like | ||||||||
Protein Properties | Length: 406aa MW: 44608.8 Da PI: 5.0831 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 17.6 | 7.8e-06 | 4 | 44 | 5 | 39 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 +C+ +++++ +C+++ +lC +C + H+ H++ XP_028121734.1 4 MCDFCGDQRSMVYCRSDAACLCLSCDRNVHSAnalsrrHSR 44 6*****************************65677777765 PP | |||||||
2 | zf-B_box | 21.2 | 6.2e-07 | 46 | 86 | 4 | 38 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 +C++++++++ + C + + lC++C +H g H+ XP_028121734.1 46 LVCERCNSQPAFIRCVEERISLCQNCDWLGHTGsteastHK 86 68*****************************7777777777 PP | |||||||
3 | CCT | 63 | 9.4e-22 | 349 | 392 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R a++RY eK+ktRkF+Kk+rY+sRKa+A+ R RvKGrFvk+ XP_028121734.1 349 RSSAVMRYMEKKKTRKFDKKVRYASRKARADVRRRVKGRFVKAG 392 889**************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 406 aa Download sequence |
MGYMCDFCGD QRSMVYCRSD AACLCLSCDR NVHSANALSR RHSRTLVCER CNSQPAFIRC 60 VEERISLCQN CDWLGHTGST EASTHKKQAV NCYSGCPSAA ELSTIWSFVL DIPSVGDSTC 120 EKGMSLMSIT DNSLTNSMDP PQSKDGQDVS VFIEENDVKN IDKSSDWMGS SAMPELRTKR 180 QNVNSTSSKT CCPGTKASDL EEDDKFYEDF NMDEVDLNIE NYEEIFGVAL NDPEQLFGND 240 GIGSLFGVKD MSGADLNRRG TYAAEGSSIG LVKSMQPAIS NPASADSVIS SKTDPNLCFA 300 TQAHSSISFS GLSVESSAAD HQDCGASPMV LMGEPPPWCP ESSFPSTSRS SAVMRYMEKK 360 KTRKFDKKVR YASRKARADV RRRVKGRFVK AGDAYDYDPL NETRSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07650.2 | 1e-121 | CO-like family protein |