PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028121494.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 193aa MW: 22059.8 Da PI: 9.3292 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 63.7 | 3.5e-20 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l+++v+ +G + WktIa + g++R++k+c++rw++yl XP_028121494.1 16 KGAWTSEEDRKLAQYVEVHGAKKWKTIATKSGLNRCGKSCRLRWLNYL 63 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.4 | 2.9e-17 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T eE++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_028121494.1 69 RGNITDEEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 114 7999******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MAPKSSEGLA KKVYNKGAWT SEEDRKLAQY VEVHGAKKWK TIATKSGLNR CGKSCRLRWL 60 NYLRPNIKRG NITDEEEDLI LRLHKLLGNR WSLIAGRLPG RTDNEIKNYW NSHLSRKINQ 120 KGKMTTTSPE QESTPEKTAD SDVKREGTKG SGDGEFMLDV NEFFDFSTGG TYGLDWVNKF 180 LELDDDQALT DKW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G40330.1 | 2e-54 | MYB family protein |