PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028121230.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Trihelix

Protein Properties

Length: 273aa MW: 32379.5 Da PI: 8.0786

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028121230.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	81	1.6e-25	31	113	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ qe+++ +++r e++ ++ ++k++k lWe ++ km+e+g++rs++qCk+kw+nl +ryk ++++e ++ ++++p++++l+ XP_028121230.1 31 QWSIQETRDFLTIRAELDPTFMETKRNKLLWEVIATKMKEKGYNRSAEQCKCKWKNLVTRYKGCETMEPEG---MRQQFPFYNELQ 113 7******************************************************************97...56679**997 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MEGSYHHHQQ QHPQHPHQIS VNIDTGDRFP QWSIQETRDF LTIRAELDPT FMETKRNKLL 60 WEVIATKMKE KGYNRSAEQC KCKWKNLVTR YKGCETMEPE GMRQQFPFYN ELQTIFAARM 120 QRMLWIEAEG GGGGASGSKK KGVSSDDDDD NEESEGEKGG SKKKRKVAKG GPTNNPSSSG 180 NINGLKEVME EFMKQQMQME MQWIKLYEAR EEERRMKEME WRQTMESLEN ERLIMDRRMR 240 EREEQRRVRE EARAEKRDAL ITTLLNKYRR EDM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	162	167	KKKRKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	9e-53	Trihelix family protein