PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028121180.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 325aa    MW: 37340.5 Da    PI: 9.3153
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028121180.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding582.2e-181762147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ede+l ++v+q+G+ +W++Ia++++ gR++k+c++rw++ 
   XP_028121180.1 17 RGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQ-GRSGKSCRLRWFNQ 62
                     899*****************************.***********996 PP
2Myb_DNA-binding591e-1869112146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r ++T+eE+e+l+ a++ +G++ W++I+r ++ gRt++ +k++w+ 
   XP_028121180.1  69 RRPFTEEEEERLLAAHRIHGNK-WALISRLFP-GRTDNAVKNHWHV 112
                      679*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MDETLGGSSD DTRTCPRGHW RPAEDEKLRQ LVEQYGPQNW NSIAEKLQGR SGKSCRLRWF  60
NQLDPRINRR PFTEEEEERL LAAHRIHGNK WALISRLFPG RTDNAVKNHW HVIMARKQRE  120
QSKLCGKRIY QDTIESSSNA SPSFGFRRRN SRTQEDYSLK CHFEGIKFFE FQTLNKDRIF  180
PVSPSSSSPS WNFTRPTASA TNNSSSVDLF GREGTDYINS STYYCTTDSS NSSDQPLYRY  240
GCRDFSPFGL PNYKRVVPSP FGYSKLGDGN RAHGVIKRDL VSFGDNLHPF AKIRRAMDEE  300
ENQNESVKQK DNIPAFIDFL GVGIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.15e-64MYB family protein