PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028120269.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 284aa    MW: 32759.1 Da    PI: 7.4568
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028120269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.41.4e-124794148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W+ eEd++l+++++++    W+  ++  g+ R++k+c++rw +yl
   XP_028120269.1 47 KGAWSREEDQKLINYINKYRIWIWSEMPKAAGLLRSGKSCRLRWVNYL 94
                     79*****************999**********99************97 PP
2Myb_DNA-binding51.62.1e-16100143146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++T eE+e +++ +++lG++ W++Ia+ ++ gRt++++k++w++
   XP_028120269.1 100 RGNFTREEEETILNMHEMLGNK-WSAIAAALP-GRTDNEIKNYWHS 143
                      89********************.*********.***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MMCVCLSLSP SIYINSFLEG LGNSSKLGYN LTEMMRTLHF DKKTLKKGAW SREEDQKLIN  60
YINKYRIWIW SEMPKAAGLL RSGKSCRLRW VNYLKPGIRR GNFTREEEET ILNMHEMLGN  120
KWSAIAAALP GRTDNEIKNY WHSRLKKRLR KPRTQSQASS STEVSEWPRN VPDSAQPPFS  180
VCLSPNTGPA VWINENQNIE ANLGSKLETF DGLLSSCENQ NMEENLYLEN LQEMFENPGF  240
ALPQSELWFS EPTSPYGFYH DPWFNFNLSV QSDMAGVKEP NVHF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1144150RLKKRLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.18e-50MYB family protein