PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028120168.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 206aa MW: 24077.2 Da PI: 9.8965 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.5 | 6.3e-20 | 36 | 90 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++f++eq++ Le++Fe++ ++ +++ +LA++lgL+ rq+ +WFqNrRa++k XP_028120168.1 36 KNKRRFSDEQIRSLESMFESETKLEPRKKVQLARELGLQPRQIAIWFQNRRARWK 90 67889*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 124.5 | 5.1e-40 | 37 | 128 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+s+eq+++LE++Fe+e+kLep++Kv+lareLglqprq+a+WFqnrRAR+k+kq+E++y++Lk++yd+l+++ e+L+ e+++L +l++ XP_028120168.1 37 NKRRFSDEQIRSLESMFESETKLEPRKKVQLARELGLQPRQIAIWFQNRRARWKSKQMEQEYKVLKANYDNLHSKFESLKIEKQSLLIQLQN 128 79************************************************************************************999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MEGEEYYCAP QPLEATKIES LPFPKPLQNL RKKKNKNKRR FSDEQIRSLE SMFESETKLE 60 PRKKVQLARE LGLQPRQIAI WFQNRRARWK SKQMEQEYKV LKANYDNLHS KFESLKIEKQ 120 SLLIQLQNLT DLLGKPHNQG IKSKDSKENI TSGGSDSKDT RREPELHNMG GQVDGSLALP 180 EKWSNFESSG LFDRSCGSSN WWDFWS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 85 | 93 | RRARWKSKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 4e-42 | HD-ZIP family protein |