PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028119826.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 292aa    MW: 32841 Da    PI: 8.2173
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028119826.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding551.9e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+++++ +G g+W++ ++  g+ R++k+c++rw +yl
   XP_028119826.1 14 KGAWTKEEDQRLINYIRSHGEGCWRSLPKSAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP

2Myb_DNA-binding57.92.3e-1867111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg++T++Edel+++++ +lG++ W++Ia +++ gRt++++k++w+++
   XP_028119826.1  67 RGNFTEQEDELIIKLHSMLGNK-WSLIAGRLP-GRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MGRSPCCEKA HTNKGAWTKE EDQRLINYIR SHGEGCWRSL PKSAGLLRCG KSCRLRWINY  60
LRPDLKRGNF TEQEDELIIK LHSMLGNKWS LIAGRLPGRT DNEIKNYWNT HIKRKLIVRG  120
LDPQTHRPLN ATASTTTANS KFDFRNASHS YSTLTDIDLT MNQNTFKLIA MADDSSFDDG  180
KCNSGTTEEA PPQLLQPPPL LAHHSDQNCQ SINLDLSIGL VPFQSLTRSE SANSNSAEIE  240
LKKEQEEVVP YQFVVAARPS ETPAPQAVCV CWQLSFQRGQ LCSNCSTNGL HR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09460.18e-89MYB family protein