PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028119826.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 292aa MW: 32841 Da PI: 8.2173 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55 | 1.9e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+++++ +G g+W++ ++ g+ R++k+c++rw +yl XP_028119826.1 14 KGAWTKEEDQRLINYIRSHGEGCWRSLPKSAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 57.9 | 2.3e-18 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T++Edel+++++ +lG++ W++Ia +++ gRt++++k++w+++ XP_028119826.1 67 RGNFTEQEDELIIKLHSMLGNK-WSLIAGRLP-GRTDNEIKNYWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MGRSPCCEKA HTNKGAWTKE EDQRLINYIR SHGEGCWRSL PKSAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TEQEDELIIK LHSMLGNKWS LIAGRLPGRT DNEIKNYWNT HIKRKLIVRG 120 LDPQTHRPLN ATASTTTANS KFDFRNASHS YSTLTDIDLT MNQNTFKLIA MADDSSFDDG 180 KCNSGTTEEA PPQLLQPPPL LAHHSDQNCQ SINLDLSIGL VPFQSLTRSE SANSNSAEIE 240 LKKEQEEVVP YQFVVAARPS ETPAPQAVCV CWQLSFQRGQ LCSNCSTNGL HR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09460.1 | 8e-89 | MYB family protein |