PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028119800.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 343aa MW: 36345 Da PI: 6.4014

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028119800.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	84	3.6e-26	1	86	24	89
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg...................k 89 ++a caar+F+L++eLG+++d++tieWLlqqa+pai+ +tgt++++a+++ ++s +s +s+ s++ XP_028119800.1 1 MPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAIISATGTGTIPANFStLNVSLRSGGSTISAPssksaplggltlahhhhphY 86 9**********************************************999766666666663333333344455444433333331 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MPAACAARVF QLTRELGHKS DGETIEWLLQ QAEPAIISAT GTGTIPANFS TLNVSLRSGG 60 STISAPSSKS APLGGLTLAH HHHPHYEEGF SHMLGFHHHQ NPQFLTADQI ARAMPSGGGG 120 GESAENYLRK RFREDLFKEE SQRPQGEVSA SSTSPPSNKQ QQQGAGGPSS SMLQYTNMMA 180 ATAMWAVAPA PSTGTGNTFW MLPVPAAAGG NGNDQSANTS GASSSDQPQM WPFASAPTTT 240 SGNTLQAPLH FMPRFNIPGN LEFQGGRGNP LQLGSMLMQQ QPSQHLGLGM SETNLGMLAA 300 LNAYSRGSLN MNSEQNNPLE HHHQQHQPQA ADSGEDDPNT SSQ

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MPAACAARVF QLTRELGHKS DGETIEWLLQ QAEPAIISAT GTGTIPANFS TLNVSLRSGG  60
STISAPSSKS APLGGLTLAH HHHPHYEEGF SHMLGFHHHQ NPQFLTADQI ARAMPSGGGG  120
GESAENYLRK RFREDLFKEE SQRPQGEVSA SSTSPPSNKQ QQQGAGGPSS SMLQYTNMMA  180
ATAMWAVAPA PSTGTGNTFW MLPVPAAAGG NGNDQSANTS GASSSDQPQM WPFASAPTTT  240
SGNTLQAPLH FMPRFNIPGN LEFQGGRGNP LQLGSMLMQQ QPSQHLGLGM SETNLGMLAA  300
LNAYSRGSLN MNSEQNNPLE HHHQQHQPQA ADSGEDDPNT SSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	2e-72	TCP family protein