PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028119780.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 696aa MW: 79260.2 Da PI: 6.8364

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028119780.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	50.4	4.4e-16	519	560	4	45
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP 45 +i l+d+ ++ +i+ AA++L+v++++LKriCR+yGI+RWP XP_028119780.1 519 KIPLDDILQNSRRSIEVAANNLNVSQSTLKRICRRYGIPRWP 560 688999999********************************* PP

Sequence ? help Back to Top
Protein Sequence Length: 696 aa Download sequence
MAESDAYNPF DYSGDEEGRE AAYFPDDFKQ YVDTQLNRCP VVYDVCGKDV FCGWFFWSRE 60 DDQSGHPPYI LDQKKKIKDV LRKCIRNWFG YPTVFQFWAP MTMDGRSYLT TQNQPFALST 120 FDIRIDEVKG LCGYRMISMD YKFYMDRESS DEQLGVPGRV FNHGFPEFTP NVEYYSIKEY 180 PLRNHALRCQ VKQSWAIPLF DPSTLLCVGV LEIVSTMPSK RFQSYHDSVW LKFHDYFKEV 240 GLESSISDAN HRTDVRQREA VDEISKVLKV VCEVHGLPLA QAWAPCRVDW MCKALVKGDI 300 FRLICHFSEY YKTLNVASDA QHLRKGQGVV GRAFYSPNVL LCNDVTQFSI IDYPLAHYAR 360 ADELGCCFAI CVQSSCTGND IYVLEYFMPP SNKDFGNQQI ALRKILETMK KNFQTFKFAS 420 GEELGAHLCI EKISCQNGEK LDSVQMSQTT KSLPRLEPLQ SGGEMTQLDL SNQQSMDALN 480 NESIVVRAER SNIDVTCSKE KGRTKRPKTV HNKTGVKIKI PLDDILQNSR RSIEVAANNL 540 NVSQSTLKRI CRRYGIPRWP PLKNMVGSSQ PSESFPGVDH QQIPQLSSVQ PFSQASAVVH 600 ANPHNTVIRD ANIVTVKAKY VNDIIIKFLL SLSSGLVELQ QQIANRLHLE DGTYYVKYKD 660 EDDDLIVIAC DQDLQHYIST STSSGSTTIV VFIVPK

Sequence ? help Back to Top

Protein Sequence Length: 696 aa Download sequence

MAESDAYNPF DYSGDEEGRE AAYFPDDFKQ YVDTQLNRCP VVYDVCGKDV FCGWFFWSRE  60
DDQSGHPPYI LDQKKKIKDV LRKCIRNWFG YPTVFQFWAP MTMDGRSYLT TQNQPFALST  120
FDIRIDEVKG LCGYRMISMD YKFYMDRESS DEQLGVPGRV FNHGFPEFTP NVEYYSIKEY  180
PLRNHALRCQ VKQSWAIPLF DPSTLLCVGV LEIVSTMPSK RFQSYHDSVW LKFHDYFKEV  240
GLESSISDAN HRTDVRQREA VDEISKVLKV VCEVHGLPLA QAWAPCRVDW MCKALVKGDI  300
FRLICHFSEY YKTLNVASDA QHLRKGQGVV GRAFYSPNVL LCNDVTQFSI IDYPLAHYAR  360
ADELGCCFAI CVQSSCTGND IYVLEYFMPP SNKDFGNQQI ALRKILETMK KNFQTFKFAS  420
GEELGAHLCI EKISCQNGEK LDSVQMSQTT KSLPRLEPLQ SGGEMTQLDL SNQQSMDALN  480
NESIVVRAER SNIDVTCSKE KGRTKRPKTV HNKTGVKIKI PLDDILQNSR RSIEVAANNL  540
NVSQSTLKRI CRRYGIPRWP PLKNMVGSSQ PSESFPGVDH QQIPQLSSVQ PFSQASAVVH  600
ANPHNTVIRD ANIVTVKAKY VNDIIIKFLL SLSSGLVELQ QQIANRLHLE DGTYYVKYKD  660
EDDDLIVIAC DQDLQHYIST STSSGSTTIV VFIVPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	6e-83	Nin-like family protein