PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028119779.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 700aa MW: 79713.7 Da PI: 6.8649

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028119779.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	50.4	4.5e-16	523	564	4	45
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP 45 +i l+d+ ++ +i+ AA++L+v++++LKriCR+yGI+RWP XP_028119779.1 523 KIPLDDILQNSRRSIEVAANNLNVSQSTLKRICRRYGIPRWP 564 688999999********************************* PP

Sequence ? help Back to Top
Protein Sequence Length: 700 aa Download sequence
MAESDAYNPF DYSGDEEGRE AAYFPDDFKQ YVDTQLNRCP VVYDVCGKDV FCGWFFWSRE 60 DDQSGHPPYI LDQKKKIKDV LRKCIRNWFG YPTVFQFWAP MTMDGRSYLT TQNQPFALST 120 FDIRIDEVKG LCGYRMISMD YKFYMDRESS DEQLGVPGRV FNHGFPEFTP NVEYYSIKEY 180 PLRNHALRCQ VKQSWAIPLF DPSTLLCVGV LEIVSTMPSK RFQSYHDSVW LKFHDYFKEV 240 GLESSISDAN HRTVHCNDVR QREAVDEISK VLKVVCEVHG LPLAQAWAPC RVDWMCKALV 300 KGDIFRLICH FSEYYKTLNV ASDAQHLRKG QGVVGRAFYS PNVLLCNDVT QFSIIDYPLA 360 HYARADELGC CFAICVQSSC TGNDIYVLEY FMPPSNKDFG NQQIALRKIL ETMKKNFQTF 420 KFASGEELGA HLCIEKISCQ NGEKLDSVQM SQTTKSLPRL EPLQSGGEMT QLDLSNQQSM 480 DALNNESIVV RAERSNIDVT CSKEKGRTKR PKTVHNKTGV KIKIPLDDIL QNSRRSIEVA 540 ANNLNVSQST LKRICRRYGI PRWPPLKNMV GSSQPSESFP GVDHQQIPQL SSVQPFSQAS 600 AVVHANPHNT VIRDANIVTV KAKYVNDIII KFLLSLSSGL VELQQQIANR LHLEDGTYYV 660 KYKDEDDDLI VIACDQDLQH YISTSTSSGS TTIVVFIVPK

Sequence ? help Back to Top

Protein Sequence Length: 700 aa Download sequence

MAESDAYNPF DYSGDEEGRE AAYFPDDFKQ YVDTQLNRCP VVYDVCGKDV FCGWFFWSRE  60
DDQSGHPPYI LDQKKKIKDV LRKCIRNWFG YPTVFQFWAP MTMDGRSYLT TQNQPFALST  120
FDIRIDEVKG LCGYRMISMD YKFYMDRESS DEQLGVPGRV FNHGFPEFTP NVEYYSIKEY  180
PLRNHALRCQ VKQSWAIPLF DPSTLLCVGV LEIVSTMPSK RFQSYHDSVW LKFHDYFKEV  240
GLESSISDAN HRTVHCNDVR QREAVDEISK VLKVVCEVHG LPLAQAWAPC RVDWMCKALV  300
KGDIFRLICH FSEYYKTLNV ASDAQHLRKG QGVVGRAFYS PNVLLCNDVT QFSIIDYPLA  360
HYARADELGC CFAICVQSSC TGNDIYVLEY FMPPSNKDFG NQQIALRKIL ETMKKNFQTF  420
KFASGEELGA HLCIEKISCQ NGEKLDSVQM SQTTKSLPRL EPLQSGGEMT QLDLSNQQSM  480
DALNNESIVV RAERSNIDVT CSKEKGRTKR PKTVHNKTGV KIKIPLDDIL QNSRRSIEVA  540
ANNLNVSQST LKRICRRYGI PRWPPLKNMV GSSQPSESFP GVDHQQIPQL SSVQPFSQAS  600
AVVHANPHNT VIRDANIVTV KAKYVNDIII KFLLSLSSGL VELQQQIANR LHLEDGTYYV  660
KYKDEDDDLI VIACDQDLQH YISTSTSSGS TTIVVFIVPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	3e-85	Nin-like family protein