PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028119757.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ARR-B | ||||||||
Protein Properties | Length: 355aa MW: 39859.1 Da PI: 10.0364 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 75.3 | 8e-24 | 239 | 291 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +r+ Wt LH++Fv+av+qL G +kA+Pk+il++m+ + ++++ v+SHLQkYR XP_028119757.1 239 KRVSWTAVLHSKFVDAVRQL-GVDKAVPKKILDIMNEPEISRQSVASHLQKYRN 291 69******************.********************************6 PP | |||||||
2 | Myb_DNA-binding | 32.6 | 1.8e-10 | 240 | 290 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r +WT+ ++ ++vdav+qlG + +k+I m+ ++ ++ s++qky+ XP_028119757.1 240 RVSWTAVLHSKFVDAVRQLGVDkaVPKKILDIMNePEISRQSVASHLQKYR 290 679********************************99*************7 PP | |||||||
3 | Response_reg | 80 | 8e-27 | 98 | 206 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + ++l++ +l+k +y +v++++++++al++l++++ +D++++D+ m +m+G+ell+ i e ++p+i+++a++++e + + ++ G XP_028119757.1 98 VLVVDDNAVCLKLVAALLNKCRY-KVTATTKATKALKMLRKNKksYDIVITDVVMLDMNGFELLEIIGLEM-DMPVIMMSANDDKESVMKGVRHG 190 89*********************.***************888888********************996644.8********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a+d+l Kp+ ee+ + XP_028119757.1 191 ARDYLIKPVRLEEVKN 206 *********9999865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence |
MAKISVKEWD MVKTLNEFRI QVESQCTRAY LSAQKVMPKL INEVLEAQKH DQEVAYIKGH 60 LESGEPMPNW IEAVHASLNR AAPPQSRVNA NFPEGLSVLV VDDNAVCLKL VAALLNKCRY 120 KVTATTKATK ALKMLRKNKK SYDIVITDVV MLDMNGFELL EIIGLEMDMP VIMMSANDDK 180 ESVMKGVRHG ARDYLIKPVR LEEVKNIWQH VVRKNLFNTT KSGTVQAGTD QNPPIPSSKR 240 VSWTAVLHSK FVDAVRQLGV DKAVPKKILD IMNEPEISRQ SVASHLQKYR NALRKENTKA 300 KMSQESKNNI NSNKTNGLLS NTITTSCINQ GLNTINHHNR FAEQYMSTGI TSFGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31920.1 | 1e-67 | ARR-B family protein |