PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028119567.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 300aa MW: 34183.4 Da PI: 9.1897

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028119567.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.6	5.9e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l++++k +G g+W++ ++ g++R++k+c++rw +yl XP_028119567.1 14 KGAWTKEEDERLINYIKAHGEGCWRSLPKAAGLHRCGKSCRLRWINYL 61 79********************************************97 PP
2	Myb_DNA-binding	57.4	3.4e-18	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eEdel+++++ + G++ W++Ia++m+ gRt++++k++w+++ XP_028119567.1 67 RGNFTQEEDELIIHLHGLIGNK-WSLIAARMP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MGRSPCCEKE HTNKGAWTKE EDERLINYIK AHGEGCWRSL PKAAGLHRCG KSCRLRWINY 60 LRPDLKRGNF TQEEDELIIH LHGLIGNKWS LIAARMPGRT DNEIKNYWNT HIKRKLLIRG 120 IDPQTHRPLN HTPTTTTTTT TNYIINTTTI TATATKSPHQ PSLNSMPLTI PLLDNQNGSI 180 DDASSSSSSS MINEQQQEVV HKELDLELSI SLPNPPHHHH HHHHAYSSSS SFTIVNSNES 240 KHQKQQQQQQ QQQQQQQLAY ERLFGASSLA ITRSSIHENK VGFKEFPEIL HAFGLVTPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	2e-84	MYB family protein