PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028119474.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 594aa MW: 67636 Da PI: 4.7865

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028119474.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	41.2	3.2e-13	398	439	4	45
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP 45 ei l+d+ ++ + +i+ AA +L+v+ ++LKr CR yG +RWP XP_028119474.1 398 EIPLDDILQNAKRSIQVAADNLKVSRSTLKRVCRSYGFSRWP 439 78899************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence
MAESDFSRDE EGRVAAYFPD DFKQYEDAQL NRCPVVDNYD EENIFCGWVF WSREDDQSDH 60 PPDILDLKKK IKDVLRQLSQ RWFGCPTLAQ FWVPTMTTEG RSYLTTENQP FALCTLDRRI 120 DDDVKELCGY RMISKDYKFY MDSESSDEQL GVPGRVFKHG LPECTPNVEY YSIKEYPLRD 180 HALLCQVEHS WAVPMFELST HLCVGVLQIV STTPSERFQL YNNYDWLFVL KDVGLLSSIS 240 HANRGTDFNV RHTGNDIYVL ECFMPPGIKD YGNQQTALRK ILETMKKNFQ TFKLASGDEL 300 GEHLCIEEIS FQNGENLDSA QMSQTSQTTK SLPRVEPLQS GGEMTQLDLS SQQSVDALHN 360 EWNVVSAEQS NIDVTCSQEK GKTEKPKRVH NRTGAKIEIP LDDILQNAKR SIQVAADNLK 420 VSRSTLKRVC RSYGFSRWPP HNKNMVGSSQ PSESSPGVDH QQIPQLSSDQ PFSQPSTAVV 480 HSNPHNTVIQ DANIVTVKAS YINDIIIKFP LPLSSGLVEL QQQIAKRLNL EAGSYHVKYK 540 DEEDDMILIA CDEDLQNCIG TYRLPRTSIM VSVEPKSITI DQMMASFEEN LLFE

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence

MAESDFSRDE EGRVAAYFPD DFKQYEDAQL NRCPVVDNYD EENIFCGWVF WSREDDQSDH  60
PPDILDLKKK IKDVLRQLSQ RWFGCPTLAQ FWVPTMTTEG RSYLTTENQP FALCTLDRRI  120
DDDVKELCGY RMISKDYKFY MDSESSDEQL GVPGRVFKHG LPECTPNVEY YSIKEYPLRD  180
HALLCQVEHS WAVPMFELST HLCVGVLQIV STTPSERFQL YNNYDWLFVL KDVGLLSSIS  240
HANRGTDFNV RHTGNDIYVL ECFMPPGIKD YGNQQTALRK ILETMKKNFQ TFKLASGDEL  300
GEHLCIEEIS FQNGENLDSA QMSQTSQTTK SLPRVEPLQS GGEMTQLDLS SQQSVDALHN  360
EWNVVSAEQS NIDVTCSQEK GKTEKPKRVH NRTGAKIEIP LDDILQNAKR SIQVAADNLK  420
VSRSTLKRVC RSYGFSRWPP HNKNMVGSSQ PSESSPGVDH QQIPQLSSDQ PFSQPSTAVV  480
HSNPHNTVIQ DANIVTVKAS YINDIIIKFP LPLSSGLVEL QQQIAKRLNL EAGSYHVKYK  540
DEEDDMILIA CDEDLQNCIG TYRLPRTSIM VSVEPKSITI DQMMASFEEN LLFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-25	Nin-like family protein