PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028119450.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YA
Protein Properties Length: 325aa    MW: 35407.9 Da    PI: 9.7147
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028119450.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA94.41.3e-29156212158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVNaKQy++I++RR +Rak+e+++kl  ++rkpylh SRh hA+rRpRg+gGrF
  XP_028119450.1 156 DGPIYVNAKQYHGIIRRRLSRAKAESKNKL-LRARKPYLHLSRHLHAKRRPRGCGGRF 212
                     57****************************.9*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MTMHTVYLKE HEGIVQNPTG QLSSGAVPWW GGIGSQSAYA ESFGQFKSSS MEHPTSGGQP  60
TSTKHAEHAT ELGLEKGNTT QFAIFPVSHS GDCKNSANMP MKSAPSEYRG CIELGFGQPV  120
ICAKYPYGDQ CYGLFSTYGA QIPGRIMLPL NLTTDDGPIY VNAKQYHGII RRRLSRAKAE  180
SKNKLLRARK PYLHLSRHLH AKRRPRGCGG RFLNTKTSNG DKGGTETEKP QHGRLCQPAE  240
SQDSEVLQSD SGNLKSPKRA NGKRSNLSGS EVTSMFSRGD LNLFAFNHTL PSVHSLSDVM  300
NTGHGMSIPS SKWIAAADNC CHLKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05690.12e-59NF-YA family protein