PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028119270.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 277aa    MW: 32127.9 Da    PI: 6.3135
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028119270.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.22.2e-1456103148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g+W +eEde+l   v+ +G ++W+++a   g++R++k+c+ rw +yl
   XP_028119270.1  56 KGPWYEEEDERLTAIVAVMGERRWDSVATVSGLRRSGKSCRMRWMNYL 103
                      79********************************************97 PP
2Myb_DNA-binding54.92e-17110154248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      gr ++eE+ ++++++kq+G++ W++Iar+++ gRt++++k++w+++l
   XP_028119270.1 110 GRLSAEEERIILQLHKQWGNK-WSKIARRLP-GRTDNEIKNYWRSHL 154
                      7889*****************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MEFPQSSVFH LLLPSNIFVL SSLAPCSFLY KKASPLEFLA TIVGYSVAME DEKLRKGPWY  60
EEEDERLTAI VAVMGERRWD SVATVSGLRR SGKSCRMRWM NYLRPNLKHG RLSAEEERII  120
LQLHKQWGNK WSKIARRLPG RTDNEIKNYW RSHLRKNAQV REQGNYDQSI TNNAKQDVLV  180
PKFDNGDCTS VKENILRTTD DHSDVFELSN YGIASSPYEV RISDWMSSWS DEQSEVNRHH  240
GECQSLDSGF CCYSVWNSKD HSDNGLWDSS DFLWDTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53200.16e-67MYB family protein