PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028117969.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Trihelix

Protein Properties

Length: 619aa MW: 69265.7 Da PI: 6.4012

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028117969.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	94.2	1.2e-29	60	144	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r+++lk+plWe+vs+k+++ gf+rs+k+Ckek+en+ k++k++keg++ +++ +t+++fdqlea XP_028117969.1 60 RWPRQETLALLKIRSDMDVAFRDSSLKGPLWEQVSRKLADLGFHRSAKKCKEKFENVYKYHKRTKEGRST--KPDGKTYRFFDQLEA 144 8*****************************************************************97..577889*****85 PP
2	trihelix	105.1	4.9e-33	453	538	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r++m+ +++++ k+plWee s++mr+ g++r++k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a XP_028117969.1 453 RWPKAEVQALIQLRTNMDLKYQENGPKGPLWEEMSAAMRKLGYNRNAKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 538 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
MLGVSGILGN SGGDAPQPHE SSAATTSGGE VGVAGSSTAG LSEEEKLRIE EGDRNSGGNR 60 WPRQETLALL KIRSDMDVAF RDSSLKGPLW EQVSRKLADL GFHRSAKKCK EKFENVYKYH 120 KRTKEGRSTK PDGKTYRFFD QLEALESQPP LSLLPPPPRS QTHQAAQSPN PVAVAMPMSM 180 AMPASANLPI VSQVTVPSTA NPTITLTPNL NHSSNVLSSP PPQPVPPPPQ PVPPPPPPTT 240 TTNLTNLSYS TPIPSSGPNM SMNIASISTS SSTSSDEEPE RRCKRKRKWA DFFQRLMSEV 300 IEKQEEMQKK FLETLEKRER DRLAREEAWR VQEMARLNRE HDLLIQERSM AASKDAAVIA 360 YLQKISGQEV VPKVAAQLQT HLQTRPHDNP IMPPPAAPPQ PQPQQQQQQQ EVQQQQLSPI 420 QSQLSLQTLF KTPENPKTDN GGGNFTPVAS SSRWPKAEVQ ALIQLRTNMD LKYQENGPKG 480 PLWEEMSAAM RKLGYNRNAK RCKEKWENIN KYFKKVKESN KKRPEDSKTC PYFHQLDALY 540 REKAIAVKPE NPMMVPIMVQ PEQQWPLLED HRRDQSAMED HNDDNGHNED EDDDEEDEDD 600 EAGGYEIVAN KPPSVGTDE

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

MLGVSGILGN SGGDAPQPHE SSAATTSGGE VGVAGSSTAG LSEEEKLRIE EGDRNSGGNR  60
WPRQETLALL KIRSDMDVAF RDSSLKGPLW EQVSRKLADL GFHRSAKKCK EKFENVYKYH  120
KRTKEGRSTK PDGKTYRFFD QLEALESQPP LSLLPPPPRS QTHQAAQSPN PVAVAMPMSM  180
AMPASANLPI VSQVTVPSTA NPTITLTPNL NHSSNVLSSP PPQPVPPPPQ PVPPPPPPTT  240
TTNLTNLSYS TPIPSSGPNM SMNIASISTS SSTSSDEEPE RRCKRKRKWA DFFQRLMSEV  300
IEKQEEMQKK FLETLEKRER DRLAREEAWR VQEMARLNRE HDLLIQERSM AASKDAAVIA  360
YLQKISGQEV VPKVAAQLQT HLQTRPHDNP IMPPPAAPPQ PQPQQQQQQQ EVQQQQLSPI  420
QSQLSLQTLF KTPENPKTDN GGGNFTPVAS SSRWPKAEVQ ALIQLRTNMD LKYQENGPKG  480
PLWEEMSAAM RKLGYNRNAK RCKEKWENIN KYFKKVKESN KKRPEDSKTC PYFHQLDALY  540
REKAIAVKPE NPMMVPIMVQ PEQQWPLLED HRRDQSAMED HNDDNGHNED EDDDEEDEDD  600
EAGGYEIVAN KPPSVGTDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-96	Trihelix family protein