PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028117499.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GATA | ||||||||
Protein Properties | Length: 261aa MW: 28457.3 Da PI: 8.1847 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 63.5 | 2.5e-20 | 135 | 169 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++ XP_028117499.1 135 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 169 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MYRCSSSHCN MVGSCTCGGV FHSQSNSFSM LFNHHRPFDE AEMYSFTPSS SSSCSSVDCT 60 LSLGTPSTRL TNNDETEKRV HHDRRSGSRM SNFCWDILQQ SKHTASPPPT HKAGRGSNTN 120 NSGGGGGDPL LARRCANCDT TSTPLWRNGP RGPKSLCNAC GIRFKKEERR ASAATVSTTT 180 YGGAGSGGGG VMEPPQHMMN NSWVQQHSHS QKMPCFSPAT TTTGNEFSFI DDDRDSDTGI 240 PFLSWRLNVT DRPSLVHDFT R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50870.1 | 3e-48 | GATA family protein |