PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028117476.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Nin-like
Protein Properties Length: 324aa    MW: 37060.9 Da    PI: 4.895
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028117476.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK62.28.8e-20152203252
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCR.qyGIkRWPhRkiksl 52 
                     +k++s +++s+yF++pi++AAke++++l  LK++C   +GI+RWPhRk+ sl
  XP_028117476.1 152 SKTLSRKTISEYFYMPITQAAKEMNIGLIFLKKKCNfILGIRRWPHRKLMSL 203
                     689********************************8458**********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MEMGSQWVVD EWSRYEVMAK QGDEDTFTFP TQVLPPLDFS GYSALDCQYD HLSMQESVVD  60
ALPLMGIYPT HPSCSTLDLV PSPSAIQDFL FGYGNGYGVL NQEKSPFGFE IEPHSQNQPL  120
LLCDNNAETQ EEYVKEKRVN NKRCREEKSN SSKTLSRKTI SEYFYMPITQ AAKEMNIGLI  180
FLKKKCNFIL GIRRWPHRKL MSLQTLIKNV QEMDKGETKG AEGRLKEAID VLEQERKLME  240
EVPDMQLEDK TKRLRQACFK ASYKKRKLMG AVDPHSSSSS SSSIRASNTN ATTVDFYGTW  300
EDEEEEEEIR SLLSDCFSCS NILL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.15e-50Nin-like family protein