PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028117475.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Nin-like
Protein Properties Length: 325aa    MW: 37190 Da    PI: 4.8315
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028117475.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK62.28.9e-20153204252
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCR.qyGIkRWPhRkiksl 52 
                     +k++s +++s+yF++pi++AAke++++l  LK++C   +GI+RWPhRk+ sl
  XP_028117475.1 153 SKTLSRKTISEYFYMPITQAAKEMNIGLIFLKKKCNfILGIRRWPHRKLMSL 204
                     689********************************8458**********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MEMGSQWVVD EWSRYEVMAK QGDEDTFTFP TQVLPPLDFS GYSALDCQYD HLSMQESVVD  60
ALPLMGIYPT HPSCSTLDLV PSPSAIQEDF LFGYGNGYGV LNQEKSPFGF EIEPHSQNQP  120
LLLCDNNAET QEEYVKEKRV NNKRCREEKS NSSKTLSRKT ISEYFYMPIT QAAKEMNIGL  180
IFLKKKCNFI LGIRRWPHRK LMSLQTLIKN VQEMDKGETK GAEGRLKEAI DVLEQERKLM  240
EEVPDMQLED KTKRLRQACF KASYKKRKLM GAVDPHSSSS SSSSIRASNT NATTVDFYGT  300
WEDEEEEEEI RSLLSDCFSC SNILL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.16e-50Nin-like family protein