PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028116910.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Dof | ||||||||
Protein Properties | Length: 277aa MW: 30430 Da PI: 9.6094 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 126 | 1.2e-39 | 30 | 88 | 2 | 60 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 k++al+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+ XP_028116910.1 30 KDQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKR 88 7899*****************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
MMFKGFQEVR MVDPKEETPM MLERKVRPQK DQALNCPRCN STNTKFCYYN NYSLTQPRYF 60 CKTCRRYWTE GGSLRNVPVG GGSRKNKRPL SSSSASSSHN LPDLNPPTLS NFASQNPNKT 120 HEAQVQDLNL AFPGMQDYLS ISQNNHHNSS SSSSSTLSLS TSTPISALEL LRSTGIASRG 180 LNSLIPTTTP MPDSNTLFNS GFPLQELKPN LGFPVDGFGS RYVNLHGVQE NGVGGRLMFP 240 FGMIKQNSST TSEVDHQNKG QGNSGGFWNG MLGGGSW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61850.2 | 2e-65 | Dof family protein |