PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028116848.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 335aa    MW: 36682.6 Da    PI: 5.1472
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028116848.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.83e-18254287134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs+C++ kTp+WR gp g ktLCnaCG++y++ +
  XP_028116848.1 254 CSHCQVQKTPQWRTGPLGAKTLCNACGVRYKSGR 287
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MECIEARALK SSFLSESSMK PTQQAFIDEF LSVNGINGVS CDDFSVDVFL DLSNEYFKDV  60
FVEQEESEED KDEKDEKDSL SVSSQDRVED NSYSLTTFSG TDELAVPADD LENLEWLSQF  120
VDDSVSELSP LSPVGSFNEQ TGSNSLNRSE QSSRPAIQRT PVLCFPSLVP AKARSKRSRL  180
SGGAWSRSSM SLSESSSSTT SSSTGSSPTS VFIFPNPVQA MEIVGRVGKP PVKKQKNKKT  240
AVGETGGSQN QRRCSHCQVQ KTPQWRTGPL GAKTLCNACG VRYKSGRLFP EYRPACSPTF  300
SGDVHSNSHR KVLEMRQKKE VAGAESALTS TVWSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.29e-59GATA family protein