PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028116715.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Dof

Protein Properties

Length: 463aa MW: 50017.4 Da PI: 6.5072

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028116715.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.4	9e-40	134	194	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s XP_028116715.1 134 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSA 194 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MSEAKDPAIK LFGKTIPLPD IPPPPSAGPP PLLSDSESLN LDRSSSPEDD KSSRVGEDHY 60 PDNKAPSGGS LSDTKQVDGA RPFPPEEIAD PTTVVNENPK TPSVDNEAAT LKASKTEEEQ 120 SETSNSQEKT LKKPDKILPC PRCNSMDTKF CYYNNYNVNQ PRHFCKNCQR YWTAGGTMRN 180 VPVGAGRRKN KNSASHYRHI AVSEALQNAR ADLPNGIHHS TLKPNGTVLT FGSSDTPLCG 240 ENGDDHSSGS SVTAANSKDD VGSKTGLQDP VMQNCHGFPP QVPCFPGTPW PYPWNSAQWS 300 GPVPVPAFCP PGFPMPFYPP PYWGCTIPGT WNVPWVTPPS SSPNHIAPSS GPNSPTLGKH 360 SRDENMLKQT KSGEEDPQRE NNPERSLWIP KTLRIDDPGE AAKSSIWATL GIKNDKVDSV 420 SGGGLFKPFQ PKGDGKSHVS ETSPVLQANP AALSRSLDFH ESS

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MSEAKDPAIK LFGKTIPLPD IPPPPSAGPP PLLSDSESLN LDRSSSPEDD KSSRVGEDHY  60
PDNKAPSGGS LSDTKQVDGA RPFPPEEIAD PTTVVNENPK TPSVDNEAAT LKASKTEEEQ  120
SETSNSQEKT LKKPDKILPC PRCNSMDTKF CYYNNYNVNQ PRHFCKNCQR YWTAGGTMRN  180
VPVGAGRRKN KNSASHYRHI AVSEALQNAR ADLPNGIHHS TLKPNGTVLT FGSSDTPLCG  240
ENGDDHSSGS SVTAANSKDD VGSKTGLQDP VMQNCHGFPP QVPCFPGTPW PYPWNSAQWS  300
GPVPVPAFCP PGFPMPFYPP PYWGCTIPGT WNVPWVTPPS SSPNHIAPSS GPNSPTLGKH  360
SRDENMLKQT KSGEEDPQRE NNPERSLWIP KTLRIDDPGE AAKSSIWATL GIKNDKVDSV  420
SGGGLFKPFQ PKGDGKSHVS ETSPVLQANP AALSRSLDFH ESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	4e-94	Dof family protein