PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028116714.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Dof

Protein Properties

Length: 499aa MW: 54040.1 Da PI: 6.6406

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028116714.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.2	1e-39	134	194	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s XP_028116714.1 134 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSA 194 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MSEAKDPAIK LFGKTIPLPD IPPPPSAGPP PLLSDSESLN LDRSSSPEDD KSSRVGEDHY 60 PDNKAPSGGS LSDTKQVDGA RPFPPEEIAD PTTVVNENPK TPSVDNEAAT LKASKTEEEQ 120 SETSNSQEKT LKKPDKILPC PRCNSMDTKF CYYNNYNVNQ PRHFCKNCQR YWTAGGTMRN 180 VPVGAGRRKN KNSASHYRHI AVSEALQNAR ADLPNGIHHS TLKPNGTVLT FGSSDTPLCE 240 SMASVLNIAE KTMRNCAQTG FRKPEKLIIP VSYVGGENGD DHSSGSSVTA ANSKDDVGSK 300 TGLQDPVMQN CHGFPPQVPC FPGTPWPYPW NSAQWSGPVP VPAFCPPGFP MPFYPPPYWG 360 CTIPGTWNVP WVTPPSSSPN HIAPSSGPNS PTLGKHSRDE NMLKQTKSGE EDPQRENNPE 420 RSLWIPKTLR IDDPGEAAKS SIWATLGIKN DKVDSVSGGG LFKPFQPKGD DKSHVSETSP 480 VLQANPAALS RSLDFHESS

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MSEAKDPAIK LFGKTIPLPD IPPPPSAGPP PLLSDSESLN LDRSSSPEDD KSSRVGEDHY  60
PDNKAPSGGS LSDTKQVDGA RPFPPEEIAD PTTVVNENPK TPSVDNEAAT LKASKTEEEQ  120
SETSNSQEKT LKKPDKILPC PRCNSMDTKF CYYNNYNVNQ PRHFCKNCQR YWTAGGTMRN  180
VPVGAGRRKN KNSASHYRHI AVSEALQNAR ADLPNGIHHS TLKPNGTVLT FGSSDTPLCE  240
SMASVLNIAE KTMRNCAQTG FRKPEKLIIP VSYVGGENGD DHSSGSSVTA ANSKDDVGSK  300
TGLQDPVMQN CHGFPPQVPC FPGTPWPYPW NSAQWSGPVP VPAFCPPGFP MPFYPPPYWG  360
CTIPGTWNVP WVTPPSSSPN HIAPSSGPNS PTLGKHSRDE NMLKQTKSGE EDPQRENNPE  420
RSLWIPKTLR IDDPGEAAKS SIWATLGIKN DKVDSVSGGG LFKPFQPKGD DKSHVSETSP  480
VLQANPAALS RSLDFHESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-100	Dof family protein