PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028116713.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Dof | ||||||||
Protein Properties | Length: 499aa MW: 54040.1 Da PI: 6.6406 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 126.2 | 1e-39 | 134 | 194 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s XP_028116713.1 134 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSA 194 7899******************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 499 aa Download sequence |
MSEAKDPAIK LFGKTIPLPD IPPPPSAGPP PLLSDSESLN LDRSSSPEDD KSSRVGEDHY 60 PDNKAPSGGS LSDTKQVDGA RPFPPEEIAD PTTVVNENPK TPSVDNEAAT LKASKTEEEQ 120 SETSNSQEKT LKKPDKILPC PRCNSMDTKF CYYNNYNVNQ PRHFCKNCQR YWTAGGTMRN 180 VPVGAGRRKN KNSASHYRHI AVSEALQNAR ADLPNGIHHS TLKPNGTVLT FGSSDTPLCE 240 SMASVLNIAE KTMRNCAQTG FRKPEKLIIP VSYVGGENGD DHSSGSSVTA ANSKDDVGSK 300 TGLQDPVMQN CHGFPPQVPC FPGTPWPYPW NSAQWSGPVP VPAFCPPGFP MPFYPPPYWG 360 CTIPGTWNVP WVTPPSSSPN HIAPSSGPNS PTLGKHSRDE NMLKQTKSGE EDPQRENNPE 420 RSLWIPKTLR IDDPGEAAKS SIWATLGIKN DKVDSVSGGG LFKPFQPKGD DKSHVSETSP 480 VLQANPAALS RSLDFHESS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39660.1 | 1e-100 | Dof family protein |