PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028116149.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WOX

Protein Properties

Length: 358aa MW: 38753.4 Da PI: 8.1915

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028116149.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56	6.8e-18	57	117	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ XP_028116149.1 57 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 117 89***************99***********************************995 PP
2	Wus_type_Homeobox	112	3.2e-36	56	118	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++k XP_028116149.1 56 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 118 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MASSNRHWPS MFKSKPCNTH HHHQWQHDIN PSLISSGCHR APFTSVPGSE ERTPEPKPRW 60 NPKPEQIRIL EAIFNSGMVN PPRDEIRKIR AQLQEYGQVG DANVFYWFQN RKSRSKHKNR 120 HLQNPKQPST ATAPSSSSSS SEKSSPKIAD KAGFPVSPTA SVNQTYFQST PPPPGEFLPE 180 PLFFPAAAAS VFTQGFCFPE MGHGVVHHVP VDQTVGNCSG FLLSELMMNH GGGGGGGGGY 240 GKKVEDEKMN YSVATTTTAP ITSIPHCIVS HTGTSVTVPS TISHTLGPGV GESCSATQTR 300 STVFINDVAF EVGVGPFNVR EAFGGDAVLI HSSGQPVLTN EWGVTLHSLQ HGGFYYVI

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MASSNRHWPS MFKSKPCNTH HHHQWQHDIN PSLISSGCHR APFTSVPGSE ERTPEPKPRW  60
NPKPEQIRIL EAIFNSGMVN PPRDEIRKIR AQLQEYGQVG DANVFYWFQN RKSRSKHKNR  120
HLQNPKQPST ATAPSSSSSS SEKSSPKIAD KAGFPVSPTA SVNQTYFQST PPPPGEFLPE  180
PLFFPAAAAS VFTQGFCFPE MGHGVVHHVP VDQTVGNCSG FLLSELMMNH GGGGGGGGGY  240
GKKVEDEKMN YSVATTTTAP ITSIPHCIVS HTGTSVTVPS TISHTLGPGV GESCSATQTR  300
STVFINDVAF EVGVGPFNVR EAFGGDAVLI HSSGQPVLTN EWGVTLHSLQ HGGFYYVI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	3e-63	WOX family protein