PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028115885.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 298aa MW: 33080.3 Da PI: 7.6545

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028115885.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50	6.6e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed+ l+d+ +++G+g +W + + + g++R++k+c++rw++yl XP_028115885.1 14 KGPWSPDEDQTLKDYLHKHGTGgNWIALPPKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	53.2	6.7e-17	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd ++ ++++lG++ W+ Ia++++ gRt++++k++w++ XP_028115885.1 69 GGFTEEEDNIICTLHTKLGSR-WSVIASHLP-GRTDNDVKNHWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MGRAPCCDKT KVKKGPWSPD EDQTLKDYLH KHGTGGNWIA LPPKAGLKRC GKSCRLRWLN 60 YLRPDIKHGG FTEEEDNIIC TLHTKLGSRW SVIASHLPGR TDNDVKNHWN TKLKKKLLPL 120 KTNIANTFNN PIPSMSLLPK TEPYSTTTNN NSSFLALLNQ SPLSMSSLTN LTCELNNTTN 180 SQSLTNYPVH YYPLPELPEP FKFGASLKRS YVNSSSSSQD SASSNVVDVG FLMDLGTNGI 240 LHCEQVGSEV WCEETISEIG TSYADLVESC CYADTKPPPG LVYQCDQSVT NNTNINQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65790.1	7e-65	MYB family protein