PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028115851.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | YABBY | ||||||||
Protein Properties | Length: 204aa MW: 23197.4 Da PI: 6.3903 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 186.7 | 1.2e-57 | 6 | 163 | 2 | 162 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveeenlksnvekeesa 92 ++ + eq+CyvqC++C+til+vsvPs+sl++vvtvrCGhCt+llsvn+ kas +l ++ ++ +el +++++ +e+ ++ ++s XP_028115851.1 6 HLLDLQEQICYVQCGYCTTILLVSVPSSSLSMVVTVRCGHCTTLLSVNMIKASffphHLFSSPNQ-----DDELPKQDGSPKEEDCQKALDKRSR 95 567889*******************************************9998666333333333.....3333333333333322333333333 PP YABBY 93 stsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162 s +s e +e++++ vp + v++PPekrqr+Psayn fikeei+r+ka+ P+++h+eafsaaakn + XP_028115851.1 96 SPVISRE--DEEDEDVVPINHIVNKPPEKRQRAPSAYNNFIKEEIRRLKAEYPNMTHKEAFSAAAKNVSF 163 3333332..4555566666667*********************************************775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MSTLNHLLDL QEQICYVQCG YCTTILLVSV PSSSLSMVVT VRCGHCTTLL SVNMIKASFF 60 PHHLFSSPNQ DDELPKQDGS PKEEDCQKAL DKRSRSPVIS REDEEDEDVV PINHIVNKPP 120 EKRQRAPSAY NNFIKEEIRR LKAEYPNMTH KEAFSAAAKN VSFLMSKDNG DFFEKMTKPR 180 LEILDNIIPI QGKLTSSWTC HENL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23420.1 | 1e-50 | YABBY family protein |