PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028115735.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 309aa    MW: 35386.1 Da    PI: 6.5084
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028115735.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.56.5e-182370148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd  l + ++++G g+W++ ar+ g++Rt+k+c++rw++yl
   XP_028115735.1 23 RGPWTVEEDMTLMNFIAKHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 70
                     89********************************************97 PP
2Myb_DNA-binding50.74.3e-1676119146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T+eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
   XP_028115735.1  76 RGNITPEEQLLILELHCRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 119
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MEVEGRECNS AIQSEEEMME LRRGPWTVEE DMTLMNFIAK HGEGRWNSLA RCAGLKRTGK  60
SCRLRWLNYL RPDVRRGNIT PEEQLLILEL HCRWGNRWSK IAQHLPGRTD NEIKNYWRTR  120
VQKHAKQLQC DVNSKQFKDT MRYLWIPRLV ERIQASSTPT ATGSSSTTST TTYHHHHPNN  180
ISMRSGQVVP PPPPPATSIG GDYGGVQPEN SSTGASSDSF GTQVSPVSDL TDYYNYPVNN  240
NHNQDYYQVN QVSYPDSLTS PSGYFNHGLD FQAMEQNNNQ WFDAGGDTSD NLWNVEDIWF  300
LQQQLNNNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06490.11e-94MYB family protein