PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028114528.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 256aa MW: 29138.9 Da PI: 8.2931 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.4 | 2.5e-18 | 99 | 153 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq + Lee F+ +++++ ++++ LA+kl+L rqV vWFqNrRa+ k XP_028114528.1 99 RKKLRLTKEQSTLLEESFKFHSTLNPTQKQTLAEKLNLLPRQVEVWFQNRRARTK 153 78889************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 117.8 | 6.1e-38 | 99 | 190 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rl+keq++lLEesF+ +++L+p++K++la++L+l prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+keveeL+++lk XP_028114528.1 99 RKKLRLTKEQSTLLEESFKFHSTLNPTQKQTLAEKLNLLPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLSDENRRLKKEVEELKRSLK 190 69**************************************************************************************9886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MGDDEEEACK CNTRLGLGIG VDEFTLPKCD RAKKKQIVCL ELSIPPHMNR EAIDADYRIE 60 GSSSKTTELD KCNIEKKKCN DNNDDSDSNN NNNNNNCSRK KLRLTKEQST LLEESFKFHS 120 TLNPTQKQTL AEKLNLLPRQ VEVWFQNRRA RTKLKQTEVD CEFLKKCCER LSDENRRLKK 180 EVEELKRSLK LEQQQRQNSL FIQLQKAATL TMCPSCNKFT KVVAATTTTT INSTGTISAN 240 NDNKEKEAGA AIDVVT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 98 | 104 | SRKKLRL |
2 | 148 | 156 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 4e-53 | HD-ZIP family protein |