PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028114335.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | NF-YA | ||||||||
Protein Properties | Length: 209aa MW: 22958.5 Da PI: 9.4463 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 103.9 | 1.4e-32 | 112 | 168 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep++VNaKQy++Il+RRq+Rak+e+ +k+ +ksrkpylheSRh+hAlrR+Rg+gGrF XP_028114335.1 112 EEPVFVNAKQYHGILRRRQSRAKAESVNKV-TKSRKPYLHESRHQHALRRARGCGGRF 168 69****************************.**************************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 209 aa Download sequence |
MPSSVHDLSD DSEAEGQQKH SETQVQSSAP VTGMSYPGLT PPNVQYATPP QLGPGNTMGQ 60 AAYPYPDPYY RSIFAPYDTP PYPAQPFPAQ VTQPVFMGIQ QSGVPLPSDA VEEPVFVNAK 120 QYHGILRRRQ SRAKAESVNK VTKSRKPYLH ESRHQHALRR ARGCGGRFLN SKKAESQHQK 180 EAASGDKKSQ ANINLNCDKN DRAPSENAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G30500.2 | 1e-64 | NF-YA family protein |