PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028114277.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YA
Protein Properties Length: 329aa    MW: 35719.1 Da    PI: 8.9487
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028114277.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.49.9e-33169225158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rak+e ekkl +k+rkpylheSRh+hA+rR+Rg+gGrF
  XP_028114277.1 169 QEPVYVNAKQYHGILRRRQSRAKAELEKKL-IKARKPYLHESRHQHAMRRARGTGGRF 225
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MQSKSKSASQ VEANPYNISP SAVCAEPWWR STGYNYVPPA VIGGNTSNSS SLEQSKDGQS  60
QSDGALDEDE DDAIRESQIS ASPRSNGNYG QGHQNFQHQT SAIPPRSNES LTQPPQLELV  120
GHSIACASNP YQDPYYGGMM ATYGPQPMVP PHLFDMHHAR MLLPLEMAQE PVYVNAKQYH  180
GILRRRQSRA KAELEKKLIK ARKPYLHESR HQHAMRRARG TGGRFAKKSN NNTADETGTI  240
SGSAISSHSA SSSGSEPLHC EAAKTQNNHR EAKGPKVHET YDGRGYQNDS SLRASTYGGH  300
SAKGGEGDSS GQQWGSVSSN KASQRALAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.16e-59NF-YA family protein