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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028114078.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 423aa MW: 46414.2 Da PI: 9.5827 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.1 | 3.8e-17 | 74 | 133 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g XP_028114078.1 74 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 133 57*******************766644468557*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 423 aa Download sequence |
MASSSSEPAL KAETGGGGGG GSGGSGGETS EAAVIANDQL LLYRGLKKAR KERGCTAKER 60 ISKMPPCAAG KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQVY LGAYDDEEAA 120 ARAYDLAALK YWGPGTLINF PVTDYTRDLE EMQNVSREDY LASLRRKSSG FSRGISKYRA 180 LSSRWDPSLG RMAGPDYFNS INYGTGEDEG EYSGGFCIER KIDLTPYIKW WGPSKSRQSD 240 SLSKSSEETK HGHSDDIGSE LKTLEWAIQP TEPYQMPRLG MFHEGKKKGS LSAMSILSRS 300 AAYKSLQEKA SKKQENKTDN DENENKCTIS KMDYGKAVEK SSHDGRSEGL GVALGAGGGG 360 LPLQRNMYPL APFLSAPLLT NYNTIDPLSD PVLWTTLVPV LPPGLPRAAE KQIILRAMVK 420 ARA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41710.1 | 1e-135 | AP2 family protein |