PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028114077.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

AP2

Protein Properties

Length: 425aa MW: 46798.2 Da PI: 8.6998

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028114077.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.1	3.8e-17	74	133	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g XP_028114077.1 74 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 133 57*****************766644468557***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MASSSSEPAL KAETGGGGGG GSGGSGGETS EAAVIANDQL LLYRGLKKAR KERGCTAKER 60 ISKMPPCAAG KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQVY LGAYDDEEAA 120 ARAYDLAALK YWGPGTLINF PVTDYTRDLE EMQNVSREDY LASLRRKSSG FSRGISKYRA 180 LSSRWDPSLG RMAGPDYFNS INYGEDEGEY SGGFCIERKI DLTPYIKWWG PSKSRQSDSL 240 SKSSEETKHG HSDDIGSELK TLEWAIQPTE PYQMPRLGMF HEGKKKGSLS AMSILSRSAA 300 YKSLQEKASK KQENKTDNDE NENKCTISKM DYGKAVEKSS HDGRSEGLGV ALGAGGGGLP 360 LQRNMYPLAP FLSAPLLTNY NTIDPLSDPV LWTTLVPVLP PGLPRAAEVT KTETSSDYTF 420 FQQEE

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MASSSSEPAL KAETGGGGGG GSGGSGGETS EAAVIANDQL LLYRGLKKAR KERGCTAKER  60
ISKMPPCAAG KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQVY LGAYDDEEAA  120
ARAYDLAALK YWGPGTLINF PVTDYTRDLE EMQNVSREDY LASLRRKSSG FSRGISKYRA  180
LSSRWDPSLG RMAGPDYFNS INYGEDEGEY SGGFCIERKI DLTPYIKWWG PSKSRQSDSL  240
SKSSEETKHG HSDDIGSELK TLEWAIQPTE PYQMPRLGMF HEGKKKGSLS AMSILSRSAA  300
YKSLQEKASK KQENKTDNDE NENKCTISKM DYGKAVEKSS HDGRSEGLGV ALGAGGGGLP  360
LQRNMYPLAP FLSAPLLTNY NTIDPLSDPV LWTTLVPVLP PGLPRAAEVT KTETSSDYTF  420
FQQEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41710.1	1e-135	AP2 family protein