PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028113989.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 681aa MW: 77025.3 Da PI: 5.1151

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028113989.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	52.8	7.9e-17	502	546	4	48
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 ei l+d+ +y ++++ dAA +L+v+ ++LKr CR y I+RWP Rk XP_028113989.1 502 EIPLDDILQYSKMSLMDAADNLQVGISTLKRVCRDYDIPRWPPRK 546 68899***************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 681 aa Download sequence
MAEPDKEGIA AYFPDDFKQY LDTQLSHCPA VDHFDGEDVF CGWVFWSRED DQSEHPPNIL 60 DLKKKIKDLL RKGLDCWLES PALIQFWAPK MTMDGRSYLT TQNQPFALST SEEEIDDVKG 120 LCGYRMISKD YKFYMDRESS DEQLGVPGRV FNHGSPEFSP NVEYYSIKEY PLRHHALRCQ 180 VEQSWAIPLF DPSTLLCVGV LEIVSTARRG IDFLVLHDYL EEVGLEYSIS HADHDTDDTD 240 LVQKVIQKSH AFNEIRKVLE VVCEDHDLPL AQAWALVKGD IFHVIQSFEK SGYFEFSRVN 300 GVSHLRKWQG VVGRAFSSPN VLFCKDVTQL SMIDYPLAHC ARLQKLGCCF AIGLQSSCTG 360 NDIYVLECFM PPSNKDYYGN QQTALRKILE TMKKIFHTFK LASGEELGGH LYIEEIPFQN 420 GEKLDSIQMS QTTKSLPRLE PLQSGGEMTQ LDLSNQQSMD ALNNESNVVS AERGNIDVTC 480 SQEKGKTKRP KRGHNKTGVK IEIPLDDILQ YSKMSLMDAA DNLQVGISTL KRVCRDYDIP 540 RWPPRKKNMG GCCQPSESSP GVDHQQIPQL SSDQPFSQAS AAVVHANPRN TVIQDANIVT 600 VKVKYINDII MKFSLSLSSG LVELQQQIAN RLHLEDGTYY VKYKDEDDDL IAIVCDQDLQ 660 DYISSSKSLG STTIMVFIVP K

Sequence ? help Back to Top

Protein Sequence Length: 681 aa Download sequence

MAEPDKEGIA AYFPDDFKQY LDTQLSHCPA VDHFDGEDVF CGWVFWSRED DQSEHPPNIL  60
DLKKKIKDLL RKGLDCWLES PALIQFWAPK MTMDGRSYLT TQNQPFALST SEEEIDDVKG  120
LCGYRMISKD YKFYMDRESS DEQLGVPGRV FNHGSPEFSP NVEYYSIKEY PLRHHALRCQ  180
VEQSWAIPLF DPSTLLCVGV LEIVSTARRG IDFLVLHDYL EEVGLEYSIS HADHDTDDTD  240
LVQKVIQKSH AFNEIRKVLE VVCEDHDLPL AQAWALVKGD IFHVIQSFEK SGYFEFSRVN  300
GVSHLRKWQG VVGRAFSSPN VLFCKDVTQL SMIDYPLAHC ARLQKLGCCF AIGLQSSCTG  360
NDIYVLECFM PPSNKDYYGN QQTALRKILE TMKKIFHTFK LASGEELGGH LYIEEIPFQN  420
GEKLDSIQMS QTTKSLPRLE PLQSGGEMTQ LDLSNQQSMD ALNNESNVVS AERGNIDVTC  480
SQEKGKTKRP KRGHNKTGVK IEIPLDDILQ YSKMSLMDAA DNLQVGISTL KRVCRDYDIP  540
RWPPRKKNMG GCCQPSESSP GVDHQQIPQL SSDQPFSQAS AAVVHANPRN TVIQDANIVT  600
VKVKYINDII MKFSLSLSSG LVELQQQIAN RLHLEDGTYY VKYKDEDDDL IAIVCDQDLQ  660
DYISSSKSLG STTIMVFIVP K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	7e-78	Nin-like family protein