PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028113747.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 496aa MW: 56436.3 Da PI: 7.4961

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028113747.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	60.1	4e-19	313	361	4	52
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +i led+ ++ +l++++AAk+L+v+ ++LKr CR +GI+RWP Rk++++ XP_028113747.1 313 KIPLEDILQNSELSLENAAKSLKVSKSTLKRVCRTFGIERWPPRKMNKV 361 6889*******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MADAEGKYVL NLPDDFKEYM YKELNFWPLH LFYLSEYLYG GVFWSREDDE PQRPSTLPDG 60 DISNLNKIIR HLLSRIIHWT LCPMLVQFWA PITTKEGRPF LTTRNQPFSL SSCFYDFNIE 120 GLCGYRMICM DSKGPLAHHA RKAGLSGCFA ICLESNYIGN DVYVLEFFMP MSNNASENPH 180 TSLRKILETM RENFRCLRVA SRELWEKLHI EEISIQNGEK LDPVQNPQTT ISLPQLELSQ 240 SEVEVIQVDS SDQQLVNAIN TGSNVGNTEH NNFAITFTQE KSTVKVSKRK GNKSGGTVKT 300 SKRDGNNIGV KIKIPLEDIL QNSELSLENA AKSLKVSKST LKRVCRTFGI ERWPPRKMNK 360 VGCSQLDESA QCVNSDHLPS TQSSATIVHT EPHDKTMQDA NIVTVKAKYG EGITMKFRLS 420 LSSRFVQLQQ EVAKRLNLKA GTYYVKYEDE DGELILIGCD EDLQDYMRDS RSLGRSSIVV 480 LLEQKLPITD HKKNKK

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MADAEGKYVL NLPDDFKEYM YKELNFWPLH LFYLSEYLYG GVFWSREDDE PQRPSTLPDG  60
DISNLNKIIR HLLSRIIHWT LCPMLVQFWA PITTKEGRPF LTTRNQPFSL SSCFYDFNIE  120
GLCGYRMICM DSKGPLAHHA RKAGLSGCFA ICLESNYIGN DVYVLEFFMP MSNNASENPH  180
TSLRKILETM RENFRCLRVA SRELWEKLHI EEISIQNGEK LDPVQNPQTT ISLPQLELSQ  240
SEVEVIQVDS SDQQLVNAIN TGSNVGNTEH NNFAITFTQE KSTVKVSKRK GNKSGGTVKT  300
SKRDGNNIGV KIKIPLEDIL QNSELSLENA AKSLKVSKST LKRVCRTFGI ERWPPRKMNK  360
VGCSQLDESA QCVNSDHLPS TQSSATIVHT EPHDKTMQDA NIVTVKAKYG EGITMKFRLS  420
LSSRFVQLQQ EVAKRLNLKA GTYYVKYEDE DGELILIGCD EDLQDYMRDS RSLGRSSIVV  480
LLEQKLPITD HKKNKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	9e-27	Nin-like family protein