PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028113731.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Dof

Protein Properties

Length: 462aa MW: 50628.5 Da PI: 6.0318

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028113731.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.7	1.5e-39	138	198	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny++sqPr+fCk+C+ryWt+GG++rnvP+G+grrknk+ss XP_028113731.1 138 PDKILPCPRCNSMDTKFCYYNNYNISQPRHFCKSCQRYWTAGGTMRNVPIGAGRRKNKNSS 198 7899******************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MRDPAIKLFG MEITLPETGK ILVGEDCGVE DGRSDGDRSS VMSSCLEDEK MDKKVKRTGD 60 EEEEEKKVEA DDDKDSQAGK PDESKQRGKS PPSETLPEFE DNPKTPSLDE ENASAKPQKN 120 ENDQSDANNT QQKTLKKPDK ILPCPRCNSM DTKFCYYNNY NISQPRHFCK SCQRYWTAGG 180 TMRNVPIGAG RRKNKNSSVH CRHITISEAL HATANGFQNP TLKSNGTVLS FGPEAPLCES 240 MASVLNLAEK QKAPNGIPNG FYKVEQNGDD CSSGSSVTTS NSTEEGVRNG IQEPMMGNLN 300 GFTSQIPCLP GIPWPYWNSA APIPAVCLSG YPMPFYATPY WTVPWLPSPS PTTNQNVPCS 360 APNQNSPTLG KHSRDGDLIK KNSETSILIP KTIRIDDPDE AARSSIWATL GIKNDSSMMS 420 RGGLFKAFQP KGGEKNHTPE TNLALWANPA ALSRSLSFQE RS

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MRDPAIKLFG MEITLPETGK ILVGEDCGVE DGRSDGDRSS VMSSCLEDEK MDKKVKRTGD  60
EEEEEKKVEA DDDKDSQAGK PDESKQRGKS PPSETLPEFE DNPKTPSLDE ENASAKPQKN  120
ENDQSDANNT QQKTLKKPDK ILPCPRCNSM DTKFCYYNNY NISQPRHFCK SCQRYWTAGG  180
TMRNVPIGAG RRKNKNSSVH CRHITISEAL HATANGFQNP TLKSNGTVLS FGPEAPLCES  240
MASVLNLAEK QKAPNGIPNG FYKVEQNGDD CSSGSSVTTS NSTEEGVRNG IQEPMMGNLN  300
GFTSQIPCLP GIPWPYWNSA APIPAVCLSG YPMPFYATPY WTVPWLPSPS PTTNQNVPCS  360
APNQNSPTLG KHSRDGDLIK KNSETSILIP KTIRIDDPDE AARSSIWATL GIKNDSSMMS  420
RGGLFKAFQP KGGEKNHTPE TNLALWANPA ALSRSLSFQE RS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-105	Dof family protein