PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028113424.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Trihelix | ||||||||
Protein Properties | Length: 192aa MW: 21660 Da PI: 5.3242 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 60.9 | 3e-19 | 67 | 149 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf...erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt+ e+ Li+a++e++ +l+rg+lk ++Weev++ + ++ g+ ++s++qC++k+e+l+kr++++k+ + + yfd ++ XP_028113424.1 67 WTHPETVNLIQAYQEKWYSLKRGQLKSNQWEEVAITVaARCGYdepSKSAIQCRHKLEKLRKRFRAEKQKPYPH------AWEYFDLMD 149 ***********************************9965667765579********************998875......599999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MAATPPSSTP APPSPPTSPS PQPQDQDQDQ NHEPSSSPSP TPTPSNPESP KPLQSISPPK 60 KIQPLPWTHP ETVNLIQAYQ EKWYSLKRGQ LKSNQWEEVA ITVAARCGYD EPSKSAIQCR 120 HKLEKLRKRF RAEKQKPYPH AWEYFDLMDS MERGPLPISA RPMAMVQFHK SNPNDEEDDD 180 NDNDDLKGEG LD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24860.1 | 3e-29 | Trihelix family protein |