PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028113115.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bZIP

Protein Properties

Length: 360aa MW: 39218.3 Da PI: 5.1417

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028113115.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.5	9e-16	179	226	4	51
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 lkr++r+ +NRe+ArrsR+RK++ ++ Le+ v++L++eN+ L k+ XP_028113115.1 179 LKRAKRMVSNRESARRSRRRKQEHLADLEKQVEQLQGENSNLFKQFTG 226 8***************************************99876554 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MDQKPVEEAS IYGGRGGGGG EMKRSQSELA LEELFSKDEK VGGKIRTQRA RVFADADAFL 60 GLDVSQAHSK CFCDVCAATA DLTIPFRYQQ TMNSVPSCGG LTDNILWPEH VTSNQSCISA 120 TIESQSSICV SSPDSATKPK GIDNQTTGAT SGSSREQSDD DDIETEAGQC EQSTDPLNLK 180 RAKRMVSNRE SARRSRRRKQ EHLADLEKQV EQLQGENSNL FKQFTGASQQ FKDANTNNRV 240 LKSDVEALRA KVKLAEDMVT RGSLTMSTLS HLLQNHLSTP QQPFTTDNMC RLGNNISPTI 300 AVHEDDVSYP GITVSGQNST LGLENPNTFN GGANNDFISD TVSCVAEDWS WKSHAPTISK

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MDQKPVEEAS IYGGRGGGGG EMKRSQSELA LEELFSKDEK VGGKIRTQRA RVFADADAFL  60
GLDVSQAHSK CFCDVCAATA DLTIPFRYQQ TMNSVPSCGG LTDNILWPEH VTSNQSCISA  120
TIESQSSICV SSPDSATKPK GIDNQTTGAT SGSSREQSDD DDIETEAGQC EQSTDPLNLK  180
RAKRMVSNRE SARRSRRRKQ EHLADLEKQV EQLQGENSNL FKQFTGASQQ FKDANTNNRV  240
LKSDVEALRA KVKLAEDMVT RGSLTMSTLS HLLQNHLSTP QQPFTTDNMC RLGNNISPTI  300
AVHEDDVSYP GITVSGQNST LGLENPNTFN GGANNDFISD TVSCVAEDWS WKSHAPTISK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	13	20	GGRGGGGG
2	193	200	RRSRRRKQ
3	195	200	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	2e-62	bZIP family protein