PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028112021.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | ARR-B | ||||||||
Protein Properties | Length: 455aa MW: 51360.9 Da PI: 5.8761 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 63.8 | 3.3e-20 | 221 | 274 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rl Wt LH++Fv+av+ L G +kA+Pk+il++m+ + ++l+ v+SHL YR XP_028112021.1 221 KKRLIWTRVLHNKFVDAVRLL-GVDKAVPKKILQIMNEPVISLKSVASHLYWYRN 274 68*******************.*******************************96 PP | |||||||
2 | Myb_DNA-binding | 23 | 1.9e-07 | 223 | 272 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 r+ WT ++ ++vdav++lG + +k+I + m+ +lk++ s+++ y XP_028112021.1 223 RLIWTRVLHNKFVDAVRLLGVDkaVPKKILQIMNePVISLKSVASHLYWY 272 667********************************88999******9865 PP | |||||||
3 | Response_reg | 70 | 1e-23 | 30 | 138 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + +++++ +l+k +y +v+++++++eal++l++++ +D++++D+ +m+G+ell+ i e ++p+i+++a++++e + + + G XP_028112021.1 30 VLVVDDNVVCLKIVAALLNKCRY-KVTATTKATEALQMLRKNKesYDIVITDVIRLDMTGFELLEIIGLEM-DMPVIMMSANDDKESVMKGVMHG 122 89*********************.***************888889********************996644.8********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 ++d+l Kp+ ee+ + XP_028112021.1 123 VRDYLIKPVRLEEVKN 138 *********9999765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 455 aa Download sequence |
MSKIDVRVSL NRAAPPQSRV NANFPEGLRV LVVDDNVVCL KIVAALLNKC RYKVTATTKA 60 TEALQMLRKN KESYDIVITD VIRLDMTGFE LLEIIGLEMD MPVIMMSAND DKESVMKGVM 120 HGVRDYLIKP VRLEEVKNIW QHVVRNNLFN TMKSGTMQTG TDQNPPIPSS KRQREKSNEE 180 EEEEEEEEEE EEEEEEEEEE EDDDETNTHS NEESSAQKKK KKRLIWTRVL HNKFVDAVRL 240 LGVDKAVPKK ILQIMNEPVI SLKSVASHLY WYRNALRKEN TKANISQESE DNINSNRTNG 300 LLSDTITTSC VNQGLNTINH HNRFAEQYIS TGITSFGSRL QTFGASTSNA KLFQQNQLPP 360 KVVADQKCPT ALGSVPPSPF FAANPSPHHE LNGMRFHSIN SKAKMFDDNV KMSSQLPSFN 420 TGQSGPSSMP VGFGPYSSFS NAWSRFKSIE SNFLT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G31920.1 | 1e-65 | ARR-B family protein |