PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028111757.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 160aa MW: 18481.3 Da PI: 9.0475 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.2 | 1.9e-13 | 13 | 56 | 5 | 48 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 T +Ede+l+ + +G g+W+++++ g+ R++k+c++rw +yl XP_028111757.1 13 THQEDEKLITHISSHGHGCWSSVPKLAGLQRCEKSCRLRWINYL 56 789***************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.1 | 1.7e-17 | 62 | 105 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E+ +++d+++ lG++ W+ Ia++++ gRt++++k++w++ XP_028111757.1 62 RGSFTEQEERIIIDVHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 105 89********************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
NTNKNLHVQF SKTHQEDEKL ITHISSHGHG CWSSVPKLAG LQRCEKSCRL RWINYLRPDL 60 KRGSFTEQEE RIIIDVHRIL GNRWAQIAKH LPGRTDNEVK NFWNSCIKKK LISLGLDPNT 120 HNLLSPHQTT TNLFWCCFQC LAPNGLFSPF CLTICSLIFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12720.1 | 2e-68 | MYB family protein |