PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028111246.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Nin-like
Protein Properties Length: 268aa    MW: 28939.9 Da    PI: 8.9916
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028111246.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK36.59.4e-1271116247
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhR 47 
                     +k+i++ +l     l+ ++AA ++gv+  + Kr+CR y I RWPh 
  XP_028111246.1  71 QKKITITELLPLIGLTREAAAEKIGVSIPTFKRKCRLYSIVRWPHY 116
                     78999999999999******************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MMGSAEEERY GKIINPSMEH GPALQPDAFP NVGKIMEVDS SEQESSVRFD AANIGGNVVS  60
ANKNCTTTCS QKKITITELL PLIGLTREAA AEKIGVSIPT FKRKCRLYSI VRWPHYRNKK  120
ECRSLQQKLA ADPDQGAAGA FGHFVTGSHT GAIASNHHNS PCSKPAKRQR EKKTSPSCKT  180
PSTVATCSDP APAPMQAMST FPQIMPHLRA GQDARIEISK TTEDILIQSV EGVTTRSCLS  240
PQKRAGSDVP SIPSPKHFHC VSSLSISD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17150.17e-07Nin-like family protein