PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028111146.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 199aa MW: 21613.1 Da PI: 4.8632 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 47.5 | 2.4e-15 | 48 | 84 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+ + Tp +R+gp g++tLCnaCGl+++ kg+ XP_028111146.1 48 CQHCGVGEnsTPAMRHGPAGPRTLCNACGLMWANKGT 84 *****99889************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 199 aa Download sequence |
MYYPNRMHRK NGQFASLKEN SASSSWDSTK SCLQGDGTPR PETVVRRCQH CGVGENSTPA 60 MRHGPAGPRT LCNACGLMWA NKGTLRDLSK AGRNLCLDQI EPETPMDINP SIIEGENFCG 120 NLDNPGMPDD PSKAVTGETG SPVNPDEEDL CGIAEDHTNS LAVRIINSLC NLDEQIGNGW 180 NIVRGASKDY ILNFGYILS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G21175.1 | 3e-28 | GATA family protein |